Long Covid and Your Hypothalamus

by Deborah Maragopoulos FNP | Aug 22, 2023 | Hypothalamus | 1 comment

Long COVID is defined by new, continuing, or recurring symptoms that occur four or more weeks after initial coronavirus infection. Long COVID is associated with all ages and acute phase disease severities, with the highest percentage of diagnoses between the ages of 36 and 50 years. The majority of long COVID cases are in non-hospitalized patients with a mild acute illness.

Your hypothalamus rich in ACE 2 receptors is hit hard by covid.

Since it controls your autonomic nervous system which controls your heart rate, sex drive, memory, cognition, salt/water balance, thirst, hunger, gut function and cellular metabolism, it’s no wonder that the majority of the symptoms of long covid are signs of hypothalamus dysfunction including:

  • fatigue
  • brain fog
  • post exertional malaise
  • heart palpitations
  • dizziness
  • thirst
  • issues with sexual drive or capacity
  • gastrointestinal symptoms
  • pain
  • menstrual irregularities
  • sleep issues
  • depression
  • anxiety

People with long COVID feel doctors are not listening to them and doctors feel frustrated that they do not have the resources and the information and the time to deal with long covid.

Although there are no approved treatments for long covid, people with long COVID are experimenting with countless therapies on a trial-and-error basis.

Among the most popular are low dose naltrexone, anticoagulants, antivirals, beta blockers, statins, antihistamines to calm overactive mast cells, and probiotics to improve gut health.

Doctors are trained to tackle a couple of issues per visit and to use evidence-based approaches and to use codes to get their health system reimbursed. To make medicine systematic, doctors are trained in different specialties based on separate organ systems. Yet long COVID generally affects multiple areas of the body.

So long covid patients feel like they’re on their own. 

Long covid has been compared to CFS in that there appears to be an underlying metabolic issue. Like CFS, Ongoing immune activation and inflammation severely affect hypothalamus function perpetuating symptoms of long covid. So where can you start to get relief? 

Supporting your hypothalamus with Genesis Gold® helps optimize hypothalamus function. Genesis Gold® has helped many of my patients with CFS and now is helping my long covid patients. If you want to learn more, please join us in our Hormone Reboot Training

Hormone Reboot Training

Excerpt from The Hypothalamus Handbook

Frequently Asked Questions:

Can your hypothalamus cause weight gain?

Yes. The hypothalamus is the master regulator of metabolism, controlling how your body stores and burns energy through its signaling to the thyroid, adrenals, and pancreas. When the hypothalamus becomes dysregulated by chronic stress, poor sleep, inflammation, or blood sugar instability, it defends a higher weight "set point" — causing the body to hold onto fat regardless of diet or exercise. This makes hypothalamic dysfunction an upstream root cause of stubborn weight gain.


What is a weight set point and why won't mine move?

A weight set point is the body weight your hypothalamus works to defend, calibrated over time by stress, sleep, hormones, and inflammation. When you diet, the hypothalamus perceives scarcity and responds by slowing metabolism, increasing hunger hormones, and suppressing satiety signals to return you to that set point. This is why most people regain lost weight within two to five years of conventional dieting — the set point itself was never recalibrated, only temporarily overridden.


Why do I gain weight under stress even when I'm not eating more?

Chronic stress raises cortisol, which disrupts blood sugar regulation, promotes abdominal fat storage, and signals the hypothalamus that the body is under threat. In survival mode, the hypothalamus defends fat stores and slows metabolism — so weight can increase even without any change in calorie intake. The stress chemistry, not the food, is driving the weight gain, which is why stress reduction is essential to any lasting metabolic reset.


Why do I regain weight after stopping GLP-1 medications?

GLP-1 medications work peripherally on appetite and gastric signaling, but they do not address the underlying hypothalamic dysregulation that sets your defended weight. Because the hypothalamic set point is never recalibrated, the body resumes defending its original weight once the medication stops — leading to significant regain. Long-term success requires restoring hypothalamic regulation so the set point itself lowers, rather than relying on appetite suppression alone.


How long does it take to reset your metabolism?

Genuine metabolic recalibration takes a minimum of 90 days, because the hypothalamus needs consistent signals of safety and sufficiency before it will lower its defended set point. This differs from a diet, which produces temporary suppression the body quickly corrects. A 90-day reset typically moves through three phases: stabilizing stress chemistry (days 1–30), rebuilding metabolic efficiency (days 31–60), and lowering the weight set point (days 61–90).


Why does my thyroid feel slow even though my labs are "normal"?

Under chronic stress, the body converts thyroid hormone into reverse T3, which blocks active thyroid receptors and slows metabolism at the cellular level — even when standard lab values appear normal. This means you can experience genuine symptoms of slow metabolism, such as fatigue, cold intolerance, and brain fog, while your thyroid panel looks unremarkable. Addressing the upstream hypothalamic and stress signaling often improves thyroid conversion and symptoms.


Is stubborn weight gain a willpower problem?

No. Stubborn weight gain is a signaling problem, not a willpower problem. The hypothalamus governs weight through survival mechanisms that operate below conscious control — defending its set point by slowing metabolism and increasing hunger when it perceives threat. No amount of discipline can override this system; lasting change comes from restoring hypothalamic regulation through reduced stress, balanced blood sugar, restorative sleep, and targeted nutritional support.

About the Author - Deborah Maragopoulos FNP

Known as the Hormone Queen®️, I’ve made it my mission to help everyone - no matter their age - balance their hormones, and live the energy and joy their DNA and true destiny desires. See more about me my story here...

     

Last Updated: September 7, 2023

1 Comment

  1. Linda Miramontes Gray

    Thank you

    Reply

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